Information for 4-GCCGTGACCT (Motif 14)

A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T
Reverse Opposite:
G T C A A T C G A C T G A C G T A G T C C G T A A T G C T C A G A C T G A T G C
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.800
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.8 +/- 22.2bp
Average Position of motif in Background45.9 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:GCCGTGACCT-
---GTGACCTT
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GCCGTGACCT--
----TGACCTYA
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:GCCGTGACCT
----TGACCT
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GCCGTGACCT---
---NTGACCTTGA
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCCGTGACCT------
NNNGTGACCTTTGNNN
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GCCGTGACCT----
----TGACCTTGAT
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCCGTGACCT--
----TGACCYCT
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCGTGACCT------
NNNNTGACCTTTNNNN
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCGTGACCT---
CNNTTGACCTTTG
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T A C G T A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCCGTGACCT
-NCGTGACN-
 A T C G T G A C A G T C A T C G G A C T A C T G C G T A G T A C A T G C A C G T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T