Information for 3-TTTWCAWNCACANAAC (Motif 4)

A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
Reverse Opposite:
C A T G C A G T G A C T A C T G C A G T C A T G C G A T A C T G C G A T C G A T A C G T C T A G C G T A G C T A T G C A T C G A
p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.567
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif475.2
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets48.4 +/- 26.0bp
Average Position of motif in Background51.6 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTTWCAWNCACANAAC---
---CGAAGCACACAAAATA
 A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTTWCAWNCACANAAC
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTTWCAWNCACANAAC
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TTTWCAWNCACANAAC
----AAACCACANN--
 A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTTWCAWNCACANAAC
TTTTCCA----------
 A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTTWCAWNCACANAAC
ATTTGCATA--------
 A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TTTWCAWNCACANAAC
---NWAACCACADNN-
 A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TTTWCAWNCACANAAC
BTVATTWGCATA--------
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TTTWCAWNCACANAAC---
CCTTTACCCTTCTTCACCTT
 A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C A C G T A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTTWCAWNCACANAAC
ATTTTCCATT--------
 A C G T A C G T A C G T A C G T C A G T C G A T G A T C G T C A C G T A C G T A T G A C G C T A G A T C G C T A A G T C C T G A G T C A G A T C
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T