Information for 3-CCGCTACTCC (Motif 7)

A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C
Reverse Opposite:
T A C G A T C G T G C A A T C G G C A T G T C A A T C G A T G C C A T G T A C G
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.632
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif108.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets49.5 +/- 28.1bp
Average Position of motif in Background50.2 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGCTACTCC-
-CNGTCCTCCC
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCGCTACTCC----
GNNAGCTAATCCCCCN
 A C G T A C G T A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCGCTACTCC
--GCTAATCC
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCGCTACTCC------
TACGAGACTCCTCTAAC
 A C G T A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCGCTACTCC--
--GCTAATCCCC
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCTACTCC------
AGGCTAATCCCCAANG
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGCTACTCC--
--NYTAATCCYB
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCGCTACTCC-----
AATCGTTAATCCCTTTA
 A C G T A C G T A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGCTACTCC--
--CCTAATCCGC
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCGCTACTCC-
--CTTAATCCC
 A T G C G T A C T A C G A T G C C A G T C G T A A T G C A C G T T A G C A T G C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C