Information for 11-AATGCAAGAA (Motif 21)

C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C T G A G T C C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.398e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 26.1bp
Average Position of motif in Background59.6 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AATGCAAGAA-
AAGGCAAGTGT
 C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGCAAGAA---
CAATTGCAAAAATAT
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AATGCAAGAA-
AGATGCAATCCC
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AATGCAAGAA-
-ATGCCAGACN
 C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATGCAAGAA--
AATCAATTCAATAATT
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AATGCAAGAA
GAAAAAATTGCAAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGCAAGAA--
ATATGCAAATNNN
 A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATGCAAGAA
MTGATGCAAT--
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATGCAAGAA--
CAAATTCCGGAACC
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A A C G T A C G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AATGCAAGAA
ATGATGCAAT--
 A C G T A C G T C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C T G C G T A G T C A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T