Information for 6-GCAAGATGGCTGC (Motif 17)

A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
Reverse Opposite:
A C T G A G T C T C G A A T C G A G T C A G T C C G T A A C G T A G T C A C G T A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.929
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.2 +/- 30.4bp
Average Position of motif in Background57.6 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GCAAGATGGCTGC
-CAAGATGGCGGC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GCAAGATGGCTGC
-CAAGATGGCGGC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCAAGATGGCTGC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCAAGATGGCTGC
AACAGATGGC---
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAAGATGGCTGC-
---TAATGGCGGNC
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAAGATGGCTGC
AACAGATGGT---
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCAAGATGGCTGC
VNAVCAGCTGGC---
 A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAAGATGGCTGC
ACCATATGGT---
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCAAGATGGCTGC
CAATGCATTGTGGGTA-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCAAGATGGCTGC
RCCATMTGTT---
 A C T G A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A G C T A C T G A G T C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T