Information for 4-CCAGAGGCCCTCG (Motif 11)

A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
Reverse Opposite:
G T A C A C T G C G T A A T C G A C T G A C T G A G T C A G T C A C G T A G T C A C G T A T C G A T C G
p-value:1e-9
log p-value:-2.136e+01
Information Content per bp:1.865
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets28.0 +/- 15.1bp
Average Position of motif in Background54.3 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCAGAGGCCCTCG
-NCGCGGACGTTG
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAGAGGCCCTCG---
-GARTGGTCATCGCCC
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G A C G T A C G T A C G T
A C G T T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CCAGAGGCCCTCG----
---CAGGCCNNGGCCNN
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PLAG1/MA0163.1/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CCAGAGGCCCTCG----
---GGGGCCCAAGGGGG
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCAGAGGCCCTCG
--CTAGGCCT---
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CCAGAGGCCCTCG
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CCAGAGGCCCTCG
--TGGGGCCCAC-
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
A C G T A C G T G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCAGAGGCCCTCG
--AGAGGAAGTG-
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CCAGAGGCCCTCG
CCAGACRSVB---
 A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCAGAGGCCCTCG
SCCTSAGGSCAW--
 A C G T A T G C A T G C G T C A A C T G G T C A A C T G A C T G G T A C A G T C A T G C A C G T A G T C A C T G
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T