Information for 7-TCAAAGTACA (Motif 16)

A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A G T C A C G T C G A T A C G T A C T G C G T A
p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.2 +/- 32.9bp
Average Position of motif in Background58.7 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGTACA--
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGTACA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAGTACA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCAAAGTACA----
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCAAAGTACA------
TTCNAAGTACTTNNNNN
 A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGTACA-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TCAAAGTACA-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TCAAAGTACA-
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCAAAGTACA
GGGGTCAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCAAAGTACA-
-CAAAGGTCAG
 A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G