Information for 5-GTCCGGGTCTCCA (Motif 13)

A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C T G C T G A A G T C G T A C G T A C A C T G A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.119e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.7 +/- 25.9bp
Average Position of motif in Background58.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCCGGGTCTCCA-----
-NTNNCGTATCCAAGTNN
 A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0077.1_Spdef_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCCGGGTCTCCA
GTACATCCGGATTTTT-
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTCCGGGTCTCCA---
----AGGTCTCTAACC
 A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCCGGGTCTCCA
TACATCCGGGT-----
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTCCGGGTCTCCA-
CGCGCCGGGTCACGTA
 A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GTCCGGGTCTCCA
ACATCCTGNT-----
 A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGGGTCTCCA---------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGGGTCTCCA-
TGCCTGCGYCMCCTT
 A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCCGGGTCTCCA
NACTTCCGGGTT----
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T

EHF/MA0598.2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCCGGGTCTCCA
TACTTCCGGGTT----
 A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C T G A C T G C T A G A G C T A G T C A C G T A G T C A G T C C G T A
G A C T C T G A A G T C A C G T C A G T A G T C A G T C A C T G A T C G A T C G C G A T C G A T A C G T A C G T A C G T A C G T