Information for 1-CGCCGCCATCTTY (Motif 1)

G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
Reverse Opposite:
C T G A C G T A C G T A T A C G C G T A A G C T A T C G A C T G A G T C C T A G C T A G G A T C A C T G
p-value:1e-14
log p-value:-3.408e+01
Information Content per bp:1.795
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif59.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets48.5 +/- 23.5bp
Average Position of motif in Background47.1 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATCTTY
-GCCGCCATCTTG
 G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CGCCGCCATCTTY
-GCNGCCATCTTG
 G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGCCGCCATCTTY
GTCCGCCATTA--
 G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATCTTY
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCGCCATCTTY
GCTCCGCCCMCY--
 A C G T G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGCCGCCATCTTY
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGCCGCCATCTTY-
----GCCATCTGTT
 G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGCCATCTTY-----
GCCTCCTCCMTCWGACTGKS
 A C G T A C G T G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGCCGCCATCTTY
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

Atf3/MA0605.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CGCCGCCATCTTY
--ACGTCATC---
 G T A C C T A G A G T C A G T C A C T G A G T C A T G C C T G A A C G T A T G C C G A T A C G T A G C T
A C G T A C G T C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T