Information for 2-YTTGGACTTTGSW (Motif 2)

A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
Reverse Opposite:
G C A T T A C G A T G C C G T A C G T A C G T A A C T G A C G T T G A C A G T C C G T A C T G A C T A G
p-value:1e-15
log p-value:-3.504e+01
Information Content per bp:1.769
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.2 +/- 21.5bp
Average Position of motif in Background64.2 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--YTTGGACTTTGSW-
NNATTGGACTTTNGNN
 A C G T A C G T A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:YTTGGACTTTGSW-----
--TGGACTTTGNNCTNTG
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:YTTGGACTTTGSW----
--TGGACTTTGNNCTCN
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:YTTGGACTTTGSW---
ATTGGACTTTGACCCC
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YTTGGACTTTGSW
-CTGACCTTTG--
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YTTGGACTTTGSW-
CCTTGCAATTTTTNN
 A C G T A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YTTGGACTTTGSW
NCTGGAATGC---
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:YTTGGACTTTGSW
--GGGAATTTCC-
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:YTTGGACTTTGSW
--GGGAATTTCC-
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YTTGGACTTTGSW
---GCACTTAA--
 A G T C A G C T C G A T A C T G A C T G C G T A T A G C A C G T A C G T C G A T A T C G A T G C C G T A
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T