Information for 7-GATTTATAGC (Motif 14)

A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
Reverse Opposite:
A C T G T A G C C G A T C G T A A C G T C G T A C G T A C G T A A C G T T A G C
p-value:1e-8
log p-value:-2.065e+01
Information Content per bp:1.849
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets65.4 +/- 22.1bp
Average Position of motif in Background44.6 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9/MA0485.1/Jaspar

Match Rank:1
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATAGC-
NTGATTTATGGCC
 A C G T A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATAGC-
TGATTTATGGCC
 A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATAGC-
TGATTTATGGCC
 A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C A C G T
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATAGC
TGATTTATGGC
 A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATAGC-
DGWTTTATGRCN
 A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GATTTATAGC
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GATTTATAGC
NNNNNNCTTTTATAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATAGC
GCTATTTATAGC
 A C G T A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTTATAGC
TCTATTTTTAGA
 A C G T A C G T A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

CDX1/MA0878.1/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GATTTATAGC
-TTTTATTGC
 A T C G G T C A A C G T A C G T C G A T C G T A A C G T C G T A A T C G T G A C
A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C