Information for 4-AAAAAATGGCDGGADG (Motif 10)

T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
Reverse Opposite:
A G T C G A C T A G C T T A G C A G T C G C T A C T A G T A G C A G T C G C T A C G A T A G C T A C G T G A C T A C G T A G C T
p-value:1e-9
log p-value:-2.232e+01
Information Content per bp:1.604
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif155.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets49.5 +/- 27.0bp
Average Position of motif in Background47.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAAATGGCDGGADG
RAACAATGGN------
 T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAATGGCDGGADG
VRAACAATGG-------
 A C G T T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAAAATGGCDGGADG
-RACAAWGG-------
 T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAATGGCDGGADG
AAAACAATGG-------
 A C G T T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAAATGGCDGGADG
-AACAAAGG-------
 T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAAATGGCDGGADG
-CAAGATGGCGGC---
 T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAAAAATGGCDGGADG
GAACAATGGN------
 T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAAAATGGCDGGADG
CTCACACAATGGCGC----
 A C G T A C G T A C G T T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAATGGCDGGADG
AAAACAAAGG-------
 A C G T T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAAAATGGCDGGADG
VRRACAAWGG-------
 A C G T T C G A T G C A C T G A T G C A C T G A C G T A C G A T C T A G A T C G A G T C C G A T T C A G A T C G T C G A C T G A A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T