Information for 2-TTTAAAATCACAW (Motif 5)

A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
Reverse Opposite:
C G A T G A C T C T A G C A G T C A T G C G T A C G A T C A G T C A G T C G A T G T C A G T C A T C G A
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.678
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif686.8
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets43.8 +/- 21.3bp
Average Position of motif in Background52.3 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAATCACAW
NATTCAAAT------
 A C G T A C G T A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTTAAAATCACAW-
----AAACCACANN
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTTAAAATCACAW--
---NWAACCACADNN
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Gfi1/MA0038.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTTAAAATCACAW
---CAAATCACTG
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTTAAAATCACAW--
----AAATCACAGCA
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTTAAAATCACAW-
----AAACCACAGC
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTTAAAATCACAW
CBTGTTTAYAWW-----
 A C G T A C G T A C G T A C G T A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTTAAAATCACAW--
----AAACCACAGAN
 A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PH0017.1_Cux1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAATCACAW
TAGTGATCATCATTA
 A C G T A C G T A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------TTTAAAATCACAW
NNNTTTGTTTACATTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T C A G T C G T A G T C A G T C A C G T A C G A T G T A C G C T A A G T C C G T A G C T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T A C G T A C G T A C G T