Information for 19-AAGGCTTGAT (Motif 43)

C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-6.986e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background39.2 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTGAT
-AAGCTTG--
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCTTGAT----
NNANTGATTGATNTTN
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTGAT--
TTTGATTGATGN
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTGAT
ATGGGGTGAT
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCTTGAT----
NNANTGATTGATNNNN
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTTGAT---
CAAAGGCGTGGCCAG
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGCTTGAT
-AGGCCTNG-
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGCTTGAT
AAGGTGTGAA
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PH0016.1_Cux1_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGGCTTGAT-------
ACCGGTTGATCACCTGA
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGGCTTGAT
-AGGTGTGA-
 C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A A C G T
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T