Information for 22-TATTAATAGTATTGAT (Motif 40)

C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
Reverse Opposite:
C T G A C A G T T G A C C G T A C G T A C G A T C G T A G T A C A G C T C G T A C G A T G C A T G T C A C G T A A C G T G T C A
p-value:1e-3
log p-value:-7.679e+00
Information Content per bp:1.763
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
GCTATTTATAGC------
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
TCTATTTATAGN------
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TATTAATAGTATTGAT
-ATGAATATTCATGAG
 C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATTAATAGTATTGAT
CCTTAATNGNTTTT--
 C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
NNTNNCAATATTAG----
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
NNTNNCAATATTAG----
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
TCTATTTTTAGA------
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TATTAATAGTATTGAT
NTAATTAATAT-------
 A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TATTAATAGTATTGAT
TCTTTANTAATANN------
 A C G T A C G T A C G T A C G T C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TATTAATAGTATTGAT
-ATGAATATTC-----
 C A G T G T C A C G A T C A G T C G T A G C T A C G A T C T G A C A T G C G A T C G T A C G A T A C G T A C T G G T C A G A C T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T A C G T