Information for 18-TCAACAAAGGGAG (Motif 37)

A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
--AACAAAGG---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
--RACAAWGG---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
-GAACAATGGN--
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
GGAACAAAGR---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAACAAAGGGAG-
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAACAAAGGGAG-
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
VRRACAAWGG---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
AAAACAAAGG---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
---ACAAAG----
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCAACAAAGGGAG
RNAACAATGG---
 A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T