Information for 7-AAGTGCCTTA (Motif 30)

C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C T G A G T C C G T A A G T C A C G T A C G T
p-value:1e-3
log p-value:-7.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.55%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background66.6 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCCTTA
TTAAGTGCTT--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGCCTTA
AATNTTAAGTGGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGCCTTA
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCCTTA
TTAAGTGC----
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGTGCCTTA
TTRAGTGSYK--
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGCCTTA
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCCTTA
NTCAAGTGGN---
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGCCTTA
TTAAGTGGN---
 A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGCCTTA
NTCAAGTGG----
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGCCTTA
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T C G T A
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A