Information for 11-SYTKCWSYARCWG (Motif 28)

T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G G A C T C G A T C T G A T A G C C G T A A C T G G T C A C G T A T C G A A T C G
p-value:1e-4
log p-value:-1.069e+01
Information Content per bp:1.755
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif118.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets65.5 +/- 21.6bp
Average Position of motif in Background51.2 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SYTKCWSYARCWG------
--CTCAGCAGCTGCTACTG
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:SYTKCWSYARCWG-
----CAGCAGCTGN
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SYTKCWSYARCWG--
----NNGCAGCTGTC
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:SYTKCWSYARCWG--
----NNGCAGCTGTT
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:SYTKCWSYARCWG--
---NNAGCAGCTGCT
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:SYTKCWSYARCWG---
------NHAACBGYYV
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:SYTKCWSYARCWG---
------CCAACTGCCA
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:SYTKCWSYARCWG--
-------CAGCTGNT
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:SYTKCWSYARCWG-----
---CGACCAACTGCCGTG
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:SYTKCWSYARCWG-----
-----TGCAGCTGTCCCT
 T A G C A G C T A C G T A C G T A G T C C G A T A T C G A G C T C G T A C T A G G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T