Information for 21-YRKMWSRMTKSRTGRK (Motif 26)

A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
Reverse Opposite:
G T C A A G C T A G T C C G T A G A C T A T C G G T A C G T C A A C G T A G C T A T G C C G A T A C T G G T A C A G C T C T A G
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.699
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.5 +/- 37.5bp
Average Position of motif in Background64.0 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:YRKMWSRMTKSRTGRK
-GTCACGCTCNCTGA-
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.55
Offset:8
Orientation:forward strand
Alignment:YRKMWSRMTKSRTGRK
--------TGCGTG--
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:YRKMWSRMTKSRTGRK-
-------TTGCGTGCVA
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:YRKMWSRMTKSRTGRK
ACTATGAATGAATGAT
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:YRKMWSRMTKSRTGRK
----ATGATKGATGRC
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:YRKMWSRMTKSRTGRK---
--NNNNNATTGATGNGTGN
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:YRKMWSRMTKSRTGRK--
------CGTGGGTGGTCC
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0167.1_Sox13_2/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:forward strand
Alignment:YRKMWSRMTKSRTGRK-----
----GTATTGGGTGGGTAATT
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Hoxa9/MA0594.1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:YRKMWSRMTKSRTGRK
-----TGATTTATGGC
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:YRKMWSRMTKSRTGRK
---TTTGATTGATGN-
 A G T C C T G A A C T G G T A C C G T A A T C G C T G A G T C A A C G T A C T G A T G C C T A G A C G T A C T G C T G A A C G T
A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T