Information for 18-WAWCYWYAWWARGRAW (Motif 23)

C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
Reverse Opposite:
G C A T C G A T A G T C A G T C A G C T A G C T C G A T C G A T A C G T C T A G C G A T C T G A A C T G G C T A A C G T C G A T
p-value:1e-5
log p-value:-1.307e+01
Information Content per bp:1.746
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif13.64%
Number of Background Sequences with motif53.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets76.7 +/- 10.8bp
Average Position of motif in Background51.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0078.1_Srf_1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WAWCYWYAWWARGRAW
-TTCCATATATGGAA-
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
A C G T G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:WAWCYWYAWWARGRAW
---CCATATATGGNA-
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
A C G T A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:WAWCYWYAWWARGRAW
---CCATATATGG---
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
A C G T A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WAWCYWYAWWARGRAW-
-AAACAGACAAAGGAAT
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WAWCYWYAWWARGRAW
AAACCACANN------
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WAWCYWYAWWARGRAW
-GNCTATAAAAGG---
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-WAWCYWYAWWARGRAW
NAAACCACAG-------
 A C G T C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:WAWCYWYAWWARGRAW
AAACCGCAAA------
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WAWCYWYAWWARGRAW
AAACCACAGAN-----
 C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-WAWCYWYAWWARGRAW
NWAACCACADNN-----
 A C G T C G T A C G T A C G A T A G T C G A C T C G T A A G T C C G T A C G T A C G T A C T G A C T G A A C T G T C A G C G T A C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T