Information for 12-CHBACVBTHTGTCHHT (Motif 17)

A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A C T G C G T A T A G C C T G A C G T A C T G A T C G A A C T G A T C G C G A T T A G C C G T A A C T G
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.648
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif122.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets57.5 +/- 20.8bp
Average Position of motif in Background45.5 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb/MA0857.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT-
-TGACCTTTTGACCTTT
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T
A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT
--------NTGTCAN-
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CHBACVBTHTGTCHHT
--------YTGWCADY
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT
-------CCTGTCAA-
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT-
-------BNTGDCCTTG
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CHBACVBTHTGTCHHT---
-------NCTGTCAATCAN
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CHBACVBTHTGTCHHT--
--AAGCACCTGTCAATAT
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT--
--------ATGACCTTGA
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CHBACVBTHTGTCHHT-
---------TGTCANYT
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CHBACVBTHTGTCHHT
-TGACCTTTTGACCTC
 A G T C G C A T A T C G C G T A T A G C T G A C A C G T A G C T G A C T A G C T A T C G C G A T A G T C G A C T G A C T A C G T
A C G T A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C