Information for 11-AWTWCYATAAATNATT (Motif 16)

G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T C G T A G T C A A C G T A C G T A C G T T G C A G A C T C T G A A C T G G C A T C G T A C G A T C A G T
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.683
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif117.5
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets58.8 +/- 15.8bp
Average Position of motif in Background54.0 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.68
Offset:9
Orientation:reverse strand
Alignment:AWTWCYATAAATNATT
---------AATTATT
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AWTWCYATAAATNATT
--GGCCATAAATCAC-
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AWTWCYATAAATNATT
--GGCCATAAATCA--
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
A C G T A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AWTWCYATAAATNATT
--NGYCATAAAWCH--
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AWTWCYATAAATNATT--
------GTTAATNATTAA
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AWTWCYATAAATNATT
---GCCATAAATCA--
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T
A C G T A C G T A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AWTWCYATAAATNATT----
-----AGTTAATGATTAACT
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AWTWCYATAAATNATT---
-----CATTAATTATTCAT
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:AWTWCYATAAATNATT-
-------TAATTGATTA
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

HNF1B/MA0153.2/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AWTWCYATAAATNATT---
------GTTAATNATTAAC
 G C T A C G T A G A C T C G A T G T A C A G C T C G T A A C G T C G T A C G T A C G T A A C G T A C G T G T C A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C