Information for 5-AAGRKCARGASMR (Motif 13)

C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
Reverse Opposite:
A G T C A C G T A T C G A G C T A G T C A G T C A C G T A T C G G T C A A G C T A G T C A G C T A C G T
p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.814
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif92.0
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets58.5 +/- 26.7bp
Average Position of motif in Background50.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAGRKCARGASMR
AAGGTCAC-----
 C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAGRKCARGASMR
TCAAGGTCAN-----
 A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGRKCARGASMR
CAAGGHCANV----
 A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGRKCARGASMR
CAAAGGTCAG-----
 A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAGRKCARGASMR
TCTCAAAGGTCACGAG--
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGRKCARGASMR
TCAAGGTCAT-----
 A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGRKCARGASMR
CAAAGGTCAAGGG--
 A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGRKCARGASMR
BTCAAGGTCA------
 A C G T A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AAGRKCARGASMR
TATTCAAGGTCATGCGA-
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AAGRKCARGASMR
ANGNAAAGGTCA------
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G C T G A A C G T A T G C C G T A C T A G A C T G C T G A A T G C G T C A C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T