Information for 4-GTGAVAAABGCTA (Motif 11)

A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
Reverse Opposite:
A C G T C T G A A T C G A T G C T C G A A C G T A C G T A C G T A G T C C G A T T G A C C G T A G T A C
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.722
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif81.5
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets38.0 +/- 10.3bp
Average Position of motif in Background48.2 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGAVAAABGCTA
AGGTGTGAAM-----
 A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGAVAAABGCTA
AGGTGTGAAA-----
 A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGAVAAABGCTA
AAGGTGTGAAA-----
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GTGAVAAABGCTA
GAAAAGGTGTGAAAATT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGAVAAABGCTA
CGGTTTCAAA-----
 A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTGAVAAABGCTA---
-TGACANARRCCAGRC
 A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A A C G T A C G T A C G T
A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTGAVAAABGCTA
AAGGTGTGAAAAT---
 A C G T A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTGAVAAABGCTA
-ANGNAAAGGTCA
 A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTGAVAAABGCTA
TGGGGCAAAGGTCA
 A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTGAVAAABGCTA
AGGTGTTAAT-----
 A C G T A C G T A C T G C G A T A C T G C G T A T A C G C G T A G T C A C G T A A C G T A T C G A T G C A G C T G T C A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T