Information for 1-CCTGCCCTGTCTAACG (Motif 1)

A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
Reverse Opposite:
G T A C T C A G A G C T C A G T C G T A A T C G C G T A A G T C C G T A A C T G A C T G A C T G A G T C C G T A T A C G C T A G
p-value:1e-12
log p-value:-2.895e+01
Information Content per bp:1.710
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif22.73%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.5 +/- 19.8bp
Average Position of motif in Background45.6 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
--TGCCCAGNHW----
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
--TGACCTYA------
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
--TGACCT--------
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CCTGCCCTGTCTAACG
-----GCTGTG-----
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTGCCCTGTCTAACG
-CTGCCCGCA------
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
-----GCTGTCAA---
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
-GTGACCTT-------
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGCCCTGTCTAACG
-CTGACCTTTG-----
 A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCCTGTCTAACG
ACATGCCCGGGCAT---
 A C G T A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCCTGTCTAACG
GGGGCCGAGGCCTG-------
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C T G G T A C A G T C A G T C A C G T A C T G G C A T A T G C G A C T G C T A T C G A A G T C A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T