Information for 6-GAGGAAAAAACAA (Motif 7)

A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGAAAAAACAA---
-AACAAACAACAAGAG
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGGAAAAAACAA--
---AAACAAACATTC
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGGAAAAAACAA
TACTGGAAAAAAAA-
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAGGAAAAAACAA----
--AAAAATAACAAACGG
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGGAAAAAACAA-
AGCCGAAAAAAAAAT
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGGAAAAAACAA----
GTTAAAAAAAAAAATTA
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAGGAAAAAACAA
-TGGAAAA-----
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGGAAAAAACAA--
----AATAAACAATN
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGGAAAAAACAA
ARGAGGMCAAAATGW
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAGGAAAAAACAA
AGAGGAA-------
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A C G T A C G T A C G T A A G T C C G T A C G T A
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T