Information for 8-AGACAATGACCAGCTC (Motif 15)

C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A T G C A C G T A C T G A C T G C G A T A G T C C T G A A C G T A C G T A C T G A C G T A T G C A C G T
p-value:1e-7
log p-value:-1.717e+01
Information Content per bp:1.921
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.5 +/- 29.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGACAATGACCAGCTC
-GACAATGNN------
 C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGACAATGACCAGCTC
TGACANARRCCAGRC-
 C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGACCAGCTC
AAAACAATGG-------
 A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGACAATGACCAGCTC
RAACAATGGN------
 C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGACAATGACCAGCTC
--ACAAAG--------
 C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGACAATGACCAGCTC
CTCACACAATGGCGC----
 A C G T A C G T A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGACCAGCTC
VRRACAAWGG-------
 A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGACAATGACCAGCTC
VRAACAATGG-------
 A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-9
Orientation:reverse strand
Alignment:---------AGACAATGACCAGCTC
NNCNNNCNCANACAATTAGNAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGACAATGACCAGCTC
AGGTCANTGACCTN---
 A C G T C G T A A T C G C G T A A G T C C G T A G T C A A G C T C T A G G C T A A G T C A G T C C G T A A T C G A G T C A C G T A G T C
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T