Information for 6-CCAHACCACCTGC (Motif 11)

A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C
Reverse Opposite:
A C T G G T A C G C T A A C T G A C T G C G A T A C T G A T C G A G C T C A G T A C G T A C T G A C T G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.764
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif59.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets56.7 +/- 28.4bp
Average Position of motif in Background51.5 +/- 44.4bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CCAHACCACCTGC--
---SNGCACCTGCHS
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCAHACCACCTGC-
----NNCACCTGNN
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCAHACCACCTGC-
----ACCACCTGTT
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCAHACCACCTGC-
----AACACCTGCT
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCAHACCACCTGC-
-----NCACCTGTN
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCAHACCACCTGC
----ACCACGTG-
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C
A C G T A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

PB0043.1_Max_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCAHACCACCTGC---
CCNNANCACGTGGTCN
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

RREB1/MA0073.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAHACCACCTGC-----
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

MAX::MYC/MA0059.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CCAHACCACCTGC--
----ACCACGTGCTC
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCAHACCACCTGC
----GCCACGTG-
 A G T C A G T C G T C A G C T A C T G A A T G C A G T C C G T A A G T C G T A C C A G T A C T G T A G C
A C G T A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T