Information for 4-GACCTGACTACTT (Motif 8)

A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T
Reverse Opposite:
C G T A C G T A A T C G A C G T C G T A C T A G A C G T A G T C C G T A C T A G A C T G A C G T G T A C
p-value:1e-5
log p-value:-1.339e+01
Information Content per bp:1.892
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif4.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.0 +/- 22.3bp
Average Position of motif in Background24.3 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0028.1_En1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACCTGACTACTT---
GNATTAATTAGTTNNC
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

DUXA/MA0884.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GACCTGACTACTT---
---NTGATTAAATTAN
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACCTGACTACTT----
NATTTAAGTACTTANNA
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0149.1_Pou3f4/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GACCTGACTACTT----
GANTTAATTAATTAANN
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T

PH0154.1_Prrx1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCTGACTACTT--
ANNAGTTAATTAGTTAN
 A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GACCTGACTACTT-------
----TGATTAATTAATTGAC
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACCTGACTACTT----
TACGAGACTCCTCTAAC
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACCTGACTACTT--
ACCGTGACTAATTNN
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PH0142.1_Pou1f1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACCTGACTACTT----
GANTTAATTAATTANNN
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

PH0146.1_Pou3f1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACCTGACTACTT----
NANTTAATTAATTANNN
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T