Information for 2-WRCCAAMCTT (Motif 7)

G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
Reverse Opposite:
G C T A C T G A A C T G C A G T A C G T A C G T A C T G A C T G G A C T C G A T
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.740
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif25.58%
Number of Background Sequences with motif2057.3
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets48.6 +/- 23.4bp
Average Position of motif in Background49.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:WRCCAAMCTT
TGCCAA----
 G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--WRCCAAMCTT
CGTGCCAAG---
 A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-WRCCAAMCTT
ATGCCAACC--
 A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----WRCCAAMCTT--
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--WRCCAAMCTT
GGTGCCAAGT--
 A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-WRCCAAMCTT
ATGCCCACC--
 A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WRCCAAMCTT----
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WRCCAAMCTT
---CAAGCTT
 G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---WRCCAAMCTT
ACTAGCCAATCA-
 A C G T A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----WRCCAAMCTT-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T G C T A C T G A A G T C A G T C G T C A C G T A G T C A G T A C A G C T C G A T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G