Information for 5-GGTACTCACC (Motif 12)

A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G C G T A A C T G A C G T C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.339e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background65.6 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGTACTCACC--
-NNACTTACCTN
 A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGTACTCACC---
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTACTCACC
AAGCACTTAA-
 A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTACTCACC--
---CCTCACCTG
 A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGTACTCACC-
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGTACTCACC-
GARTGGTCATCGCCC
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGTACTCACC
RGGGCACTAACY
 A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

PH0053.1_Hoxa6/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTACTCACC----
AAGGTAATTACCTAAT
 A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTACTCACC
CNGTCCTCCC-
 A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTACTCACC-
AGGGGAATCCCCT
 A C G T A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C C G T A A G T C A G T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T