Information for 3-GDACCTGACTGGHTHA (Motif 4)

A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
Reverse Opposite:
A C G T C G T A G T C A C G T A A T G C A G T C C G T A C T A G C G A T A T G C C G T A C T A G A C T G C G A T G A T C G T A C
p-value:1e-8
log p-value:-2.018e+01
Information Content per bp:1.689
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif35.9
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets23.6 +/- 9.8bp
Average Position of motif in Background46.6 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA---
----CTGATTGGTCNATTT
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA-
-----TGATTGGCTANN
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA-
NNTNNTGTCTGGNNTNG
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GDACCTGACTGGHTHA
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA
----CCGATTGGCT--
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA-
----NTGATTAAATTAN
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A A C G T
A C G T A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GDACCTGACTGGHTHA
----CTGTCTGG----
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA
-----TGATTAAATTA
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA--
---NWTGATTRGRTTAWN
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T C T A G C G T A A C G T A C G T C T G A T C A G C T A G A C G T A C G T G C T A C G T A G T A C

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GDACCTGACTGGHTHA
----TTGATTGN----
 A C T G C A T G C G T A G T A C A G T C A C G T A T C G C G T A A G T C A C G T C T A G A T C G G A C T A C G T G A C T G T C A
A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T