Information for 7-GCTAATATAT (Motif 27)

A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background35.3 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTAATATAT-----
ANNNGGATATATCCNNN
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTAATATAT-----
-CTAATATTGCTAAA
 A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTAATATAT-----
-CTAATATTGCTAAA
 A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTAATATAT-----
TCTTTATATATAAATA
 A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTAATATAT---
CCTTAATNGNTTTT
 A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

PB0126.1_Gata5_2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTAATATAT-----
NNNCTGATATCTCNNNN
 A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTAATATAT-
-CCAATAAAAA
 A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTAATATAT
-CTAATCGNT
 A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATATAT--
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PAX3/MA0780.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTAATATAT--
--TAATCGATTA
 A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A