Information for 11-CTCAGCBAATTGG (Motif 17)

A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G
Reverse Opposite:
A G T C A T G C C G T A C G T A A G C T A C G T T A C G A C T G A G T C A G C T A T C G C T G A A C T G
p-value:1e-5
log p-value:-1.230e+01
Information Content per bp:1.802
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets74.7 +/- 5.8bp
Average Position of motif in Background64.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCAGCBAATTGG----
-ACNNCTAATTAGNNNN
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

PH0098.1_Lhx8/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCAGCBAATTGG----
CACCGCTAATTAGNNGN
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCAGCBAATTGG-----
-AGCGCTAATTAGCGATT
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCAGCBAATTGG----
CACCGCTAATTAGCGGT
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0109.1_Nkx1-1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCAGCBAATTGG-----
-TGCGCTAATTAGTGGGA
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTCAGCBAATTGG
---AGCCAATCGG
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0094.1_Lhx4/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGCBAATTGG----
CAAAGCTAATTAGNTTN
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0097.1_Lhx6_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGCBAATTGG----
NNNCGCTAATTAGNNGA
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCAGCBAATTGG-
----GCTAATTAGN
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T
A C G T A C G T A C G T A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGCBAATTGG---
NTNAGNTAATTACCTN
 A G T C A G C T A T G C C T G A A C T G A G T C A C G T C G T A C T G A C G A T A C G T A T C G A C T G A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G