Information for 9-WYYTSTMTSMAGKCCT (Motif 10)

C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G A C T G T G A C A G T C A C G T A C T G A T C G C G T A A C G T C G T A A T G C C G T A C T A G C T G A C G T A
p-value:1e-7
log p-value:-1.619e+01
Information Content per bp:1.800
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 11.0bp
Average Position of motif in Background62.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:WYYTSTMTSMAGKCCT
--------CNAGGCCT
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:WYYTSTMTSMAGKCCT
--------CTAGGCCT
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:WYYTSTMTSMAGKCCT-------
---------CAGGCCNNGGCCNN
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----WYYTSTMTSMAGKCCT
TTTTTTTTTTTTTTCAGGTT-
 A C G T A C G T A C G T A C G T A C G T C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----WYYTSTMTSMAGKCCT
TTTTTTTTTTTTTTCAGGTT-
 A C G T A C G T A C G T A C G T A C G T C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.50
Offset:6
Orientation:forward strand
Alignment:WYYTSTMTSMAGKCCT
------NTCAAGGTCA
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:WYYTSTMTSMAGKCCT-----
-----CTTTAAGTACTTAATG
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:WYYTSTMTSMAGKCCT
-AATGTATCAAT----
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:WYYTSTMTSMAGKCCT------
-----TTTTAAGTACTTAAATT
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:WYYTSTMTSMAGKCCT----
----GGCAAAAGTCCAATAA
 C G A T A G C T A G T C A C G T A T C G A C G T G T C A A C G T T A C G G T A C C G T A A C T G A C G T A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T