Information for 4-CGTGACTTCCSGC (Motif 8)

A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
Reverse Opposite:
A C T G G T A C A T C G A T C G A C T G T G C A T G C A A C T G C G A T A T G C G T C A A G T C A T C G
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.791
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.0 +/- 23.1bp
Average Position of motif in Background60.5 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGTGACTTCCSGC
NCGTGACN------
 A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGTGACTTCCSGC
CGGTGACGTCAC--
 A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTGACTTCCSGC
NCACGTGACN------
 A C G T A C G T A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CGTGACTTCCSGC
NCACGTGACN------
 A C G T A C G T A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGTGACTTCCSGC
--TGACCYCT---
 A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTGACTTCCSGC-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------CGTGACTTCCSGC
TCAGNGAGCGTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGTGACTTCCSGC
--TGACGT-----
 A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CGTGACTTCCSGC-
----ACTTCCGGTT
 A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGTGACTTCCSGC
TCACGTGACCGG----
 A C G T A C G T A C G T A T G C C T A G A C G T A T C G C G T A A G T C A C G T A C G T A G T C T A G C A T G C A C T G A G T C
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T A C G T A C G T