Information for 3-AAVYGAAAGTRAA (Motif 5)

C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
Reverse Opposite:
A G C T A C G T A G C T C T G A T A G C A G C T A C G T A C G T A G T C C T G A A T G C C G A T C G A T
p-value:1e-14
log p-value:-3.229e+01
Information Content per bp:1.751
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.9 +/- 24.7bp
Average Position of motif in Background54.2 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0037.1_Isgf3g_1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAVYGAAAGTRAA
CAAAATCGAAACTAA-
 A C G T A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

IRF1/MA0050.2/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AAVYGAAAGTRAA-------
AAANNGAAAGTGAAAGTAAAN
 A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---AAVYGAAAGTRAA
GGAAANTGAAACTNA-
 A C G T A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AAVYGAAAGTRAA
AGAAAGTGAAAGTGA-
 A C G T A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAVYGAAAGTRAA
GAAASYGAAASY---
 A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAVYGAAAGTRAA
GRAASTGAAAST---
 A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAVYGAAAGTRAA
GAAAMTGAAACT---
 A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.75
Offset:4
Orientation:forward strand
Alignment:AAVYGAAAGTRAA---
----GAAAGTGAAAGT
 C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AAVYGAAAGTRAA--
GGAAAGCGAAACCAAAAC
 A C G T A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AAVYGAAAGTRAA
GAAAGTGAAAGT---
 A C G T A C G T C G T A C G T A T A C G A G C T C T A G C G T A C G T A C T G A A T C G G A C T C T G A C G T A C T G A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T