Information for 14-CCAGCRGCCC (Motif 24)

A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
Reverse Opposite:
A C T G A C T G C A T G T G A C G A C T A C T G G T A C A C G T C A T G A T C G
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.809
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif434.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets54.2 +/- 24.0bp
Average Position of motif in Background49.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGCRGCCC
CCAACTGCCA
 A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGCRGCCC
-YAACBGCC-
 A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CCAGCRGCCC---
----CTGCCCGCA
 A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCAGCRGCCC
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGCRGCCC--
CGACCAACTGCCGTG
 A C G T A C G T A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCRGCCC
NNGCAGCTGTC-
 A C G T A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGCRGCCC---
CGACCAACTGCCATGC
 A C G T A C G T A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCAGCRGCCC
-CAGCTGNT-
 A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C
A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCRGCCC-
GCCAGCTGBTNB
 A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAGCRGCCC--
TGCAGCTGTCCCT
 A C G T A T G C G T A C C G T A C A T G A G T C C T G A A C T G G A T C G T A C G T A C A C G T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T