Information for 12-CCTTACCAAGTAC (Motif 22)

A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A G T C A C G T A C G T A C T G A T C G A C G T C G T A C G T A A C T G A T C G
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 30.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTTACCAAGTAC-------
---TTCNAAGTACTTNNNNN
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCTTACCAAGTAC-------
---TACTAAGTACTTAAATG
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTTACCAAGTAC------
---CNTTAAGTACTTAANG
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCTTACCAAGTAC----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Nobox/MA0125.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCTTACCAAGTAC
----ACCAATTA-
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCTTACCAAGTAC
NNACTTACCTN----
 A C G T A C G T A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTTACCAAGTAC
TACCATAGCAACGGT
 A C G T A C G T A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CCTTACCAAGTAC-------
---TTTTAAGTACTTAAATT
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCTTACCAAGTAC
-----CCAATTAA
 A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCTTACCAAGTAC
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T C G T A A T G C G T A C C G T A C G T A A C T G A C G T C T G A A G T C
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A