Information for 6-CCTCGCGCCA (Motif 15)

A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A
Reverse Opposite:
A G C T A T C G A C T G A G T C A C T G G T A C T C A G T G C A C T A G A C T G
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif154.3
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets58.3 +/- 21.0bp
Average Position of motif in Background44.2 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4/MA0470.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGCGCCA
NNTTCCCGCCC
 A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCTCGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTCGCGCCA
VDTTTCCCGCCA
 A C G T A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCTCGCGCCA-----
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTCGCGCCA--
TTTCCCGCCMAV
 A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T A C G T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCTCGCGCCA
-AGCGCGCC-
 A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTCGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTCGCGCCA-
-TTCCCGCCWG
 A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T
A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

E2F1/MA0024.3/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCTCGCGCCA--
TTTGGCGCCAAA
 A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGCGCCA
NYTTCCCGCC-
 A C G T A G T C G A T C A C G T A G T C A C T G T G A C C T A G A G T C A T G C C T G A
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T