Information for 6-TGAAGATCATGTT (Motif 11)

A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C G T A C T G C G T A A G C T A G T C G A C T A C G T T A G C G T C A
p-value:1e-11
log p-value:-2.554e+01
Information Content per bp:1.840
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.9 +/- 23.3bp
Average Position of motif in Background43.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGAAGATCATGTT
TTCAAGGTCAT---
 A C G T A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGAAGATCATGTT
TCAAGGTCAT---
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGAAGATCATGTT-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAAGATCATGTT
TCAAGGTCATA--
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TGAAGATCATGTT--
---GKVTCADRTTWC
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAAGATCATGTT
TCAAGGTCAN---
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAGATCATGTT
ATCAAGGTCA----
 A C G T A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAGATCATGTT
BTCAAGGTCA----
 A C G T A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGAAGATCATGTT----
---NNGTANTGTTTTNC
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGAAGATCATGTT--
---GKMTCADRTTWC
 A C G T A C T G C G T A C T G A A C T G T C G A C G A T G T A C C G T A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C