Information for 6-CAMACWSRSARYRGKG (Motif 9)

A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C A G T C A G T C C T A G A G C T A G C T A T C G A G C T A T G C C G T A A C T G A C G T A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.483e+01
Information Content per bp:1.785
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 16.0bp
Average Position of motif in Background44.2 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAMACWSRSARYRGKG
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAMACWSRSARYRGKG
CCAGACRSVB-------
 A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAMACWSRSARYRGKG
CCAGACAG---------
 A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAMACWSRSARYRGKG
CAATCACTGGCAGAAT--
 A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:CAMACWSRSARYRGKG----
------CACAGCGGGGGGTC
 A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----CAMACWSRSARYRGKG
WNAGTCADAVTGAAACTN---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CAMACWSRSARYRGKG
CCAACTGCCA------
 A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CAMACWSRSARYRGKG
BCAGACWA---------
 A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.48
Offset:-9
Orientation:forward strand
Alignment:---------CAMACWSRSARYRGKG
NNNVCTGWGYAAACASN--------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.47
Offset:-5
Orientation:forward strand
Alignment:-----CAMACWSRSARYRGKG
CGAAGCACACAAAATA-----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A A G T C C G A T A T C G C T G A A T G C C T G A C T G A G A C T C T A G A C T G A C T G A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T A C G T A C G T A C G T