Information for 3-GAVGGAGTCACTG (Motif 8)

A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G
Reverse Opposite:
G T A C G T C A A T C G A C G T C T A G C G T A G T A C A C G T A G T C A G T C A C G T A C G T G T A C
p-value:1e-6
log p-value:-1.550e+01
Information Content per bp:1.754
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif64.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.3 +/- 34.3bp
Average Position of motif in Background61.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GAVGGAGTCACTG-
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAVGGAGTCACTG--
NTNNNGGGGTCANGNNN
 A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAVGGAGTCACTG
-----AGTCACGC
 A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAVGGAGTCACTG--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAVGGAGTCACTG--
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAVGGAGTCACTG
---TGAGTCA---
 A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAVGGAGTCACTG--
NANAGGGATTAATTATN
 A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAVGGAGTCACTG--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

FOSL1/MA0477.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAVGGAGTCACTG
-NATGAGTCACC-
 A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAVGGAGTCACTG
-GATGAGTCAT--
 A C T G G T C A T A C G A C T G A C T G G T C A A C T G A C G T A G T C C G T A A T G C A C G T A C T G
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T