Information for 18-CTCCTAATAA (Motif 41)

A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.934e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background49.2 +/- 9.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTCCTAATAA--
--CCYMATAAAA
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

EMX1/MA0612.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCCTAATAA--
--CCTAATTACC
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAATAA
GCTCGTAAAAA
 A C G T A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

EVX2/MA0888.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTCCTAATAA--
--NNTAATTANN
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

VSX2/MA0726.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCCTAATAA-
---CTAATTAG
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

VAX2/MA0723.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCCTAATAA-
---CTAATTAC
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A G T C G A C T G T C A G C T A C G A T C A G T C T G A A G T C

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTCCTAATAA
--NCTAATTA
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

VAX1/MA0722.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCCTAATAA-
---CTAATTAC
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTCCTAATAA--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

EMX2/MA0886.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTCCTAATAA--
--NCTAATTANN
 A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C