Information for 2-HBTCHATAATTTYYMA (Motif 3)

G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
Reverse Opposite:
C A G T A C G T C T G A C T G A C G T A C G T A C G T A G C A T C G A T C G T A A G C T C A T G T A C G C T G A T G A C C T A G
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.554
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets88.0 +/- 4.3bp
Average Position of motif in Background50.8 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---HBTCHATAATTTYYMA
ATGGTTCAATAATTTTG--
 A C G T A C G T A C G T G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:HBTCHATAATTTYYMA--
-TNNNATGATTTCNNCNN
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A A C G T A C G T
A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:HBTCHATAATTTYYMA
----AATAATT-----
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:HBTCHATAATTTYYMA
----NNTAATTANN--
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:HBTCHATAATTTYYMA
-ATGAATAATTAATG-
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:HBTCHATAATTTYYMA-
-ATGCATAATTAATGAG
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A A C G T
A C G T C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PH0023.1_Dlx4/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:HBTCHATAATTTYYMA--
-GTCGGTAATTATNGNGN
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A A C G T A C G T
A C G T C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:HBTCHATAATTTYYMA-
TCGCGATAATTACCGAC
 G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-HBTCHATAATTTYYMA
NNCNNAACAATTNT---
 A C G T G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-HBTCHATAATTTYYMA
TNCNNAACAATTTTTNC
 A C G T G A T C A C G T A G C T A G T C G T A C T C G A G C A T C G T A C G T A C G A T C G A T G A C T G A C T G A C T T G C A G T C A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C