Information for 11-TAATGGACTA (Motif 26)

A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.628e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX7/MA0680.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TAATGGACTA
TAATCGATTA
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PAX3/MA0780.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TAATGGACTA
TAATCGATTA
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
C G A T T C G A G T C A A G C T A G T C T C A G C T G A A C G T G A C T G C T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TAATGGACTA
TAATTGATTA
 A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATGGACTA
GKTAATGR----
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAATGGACTA
CTAATKGV---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGACTA-----
NNATTGGACTTTNGNN
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGACTA
GTTAATGGCC--
 A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGACTA
NTAATTGN---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGACTA
NTAATKGTTT-
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T

BSX/MA0876.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGACTA
NTAATTGG---
 A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T C G T A
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T A C G T