Information for 6-AGCACGGTCC (Motif 22)

C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.628e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AGCACGGTCC-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCACGGTCC--
GGAGAAAGGTGCGA
 A C G T A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCACGGTCC
-GCACGTNC-
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCACGGTCC-
-GCACGTACCC
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCACGGTCC-
TGGCACGTGCCA
 A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCACGGTCC
-GCACGTAY-
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCACGGTCC-
CGGCACGTGCCA
 A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCACGGTCC
GGCACGCGTC
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCACGGTCC
GGCACGTGNC
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCACGGTCC----
-GCACGTGTCNNNN
 C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A