Information for 8-NGGGGTCAAARWA (Motif 13)

C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A
Reverse Opposite:
C G A T G C A T A G T C C G A T A C G T G A C T T A C G C G T A T A G C G T A C G A T C A G T C C G T A
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.653
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif579.1
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets49.2 +/- 31.9bp
Average Position of motif in Background51.3 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:NGGGGTCAAARWA----
-GGGGTCAAAGTCCAAT
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-NGGGGTCAAARWA---
TATAGATCAAAGGAAAA
 A C G T C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:NGGGGTCAAARWA
CGGTTTCAAA---
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:NGGGGTCAAARWA--
-GGGGTCAAAGGTCA
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:NGGGGTCAAARWA-
AAAGATCAAAGGAA
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-NGGGGTCAAARWA---
TATAGATCAAAGGAAAA
 A C G T C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGGGGTCAAARWA--
-GGGGTCAAAGGTCA
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----NGGGGTCAAARWA
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:NGGGGTCAAARWA--
-GGGGTCAAAGGTCA
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:NGGGGTCAAARWA-------
---GTTCAAAAAAAAAATTC
 C G A T T A C G C A T G A C T G A C T G A C G T A T G C C G T A C G T A C G T A C T A G C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C