Information for 12-TCGCTGTCTC (Motif 26)

A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C T G A T A G C C T G A A C T G A G T C T C A G C T G A
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.853
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif169.5
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets53.4 +/- 32.0bp
Average Position of motif in Background52.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGCTGTCTC-
-TGCTGACTCA
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCGCTGTCTC-
---CTGTCTGG
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGCTGTCTC
--GCTGTG--
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCGCTGTCTC
-NGCTN----
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCGCTGTCTC-
-TGCTGAGTCA
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T
A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCGCTGTCTC----
--GCTGASTCAGCA
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCGCTGTCTC
--GCTGTCAA
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGCTGTCTC-----
TCACTTTCACTTTCN
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCGCTGTCTC-
-VBSYGTCTGG
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGCTGTCTC
--CCTGTCAA
 A G C T A G T C T C A G A G T C A G C T A T C G A G C T A G T C A C G T A G T C
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A