Information for 13-TGGATCCSAWCCA (Motif 22)

A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G A T A C G T A T C G A C T G A C T G C T G A A G C T A G T C A G T C C G T A
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 28.1bp
Average Position of motif in Background35.7 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGATCCSAWCCA-
TGGCAGNCTGCCAG
 A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGATCCSAWCCA-
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGGATCCSAWCCA
GTGGGCCCCA----
 A C G T A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGATCCSAWCCA---
ACTATGCCAACCTACC
 A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGATCCSAWCCA
GTGGAT--------
 A C G T A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGATCCSAWCCA
---ATGCCAACC-
 A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGATCCSAWCCA----
ANNTNCCCACCCANNAC
 A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T A C G T A C G T A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGATCCSAWCCA-
TGGCACCATGCCAA
 A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGATCCSAWCCA-
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGGATCCSAWCCA
NTATYGATCH------
 A C G T A C G T A C G T A C G T A C T G A C T G C T G A A G C T A G T C A G T C A T G C C G T A C G T A T A G C A G T C C G T A
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T